Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cdx1P18111 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 AC167565.1-201ENSMUST00000226980 1833 ntBASIC8.83□□□□□ -1
Cdx1P18111 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Cdx1P18111 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Gm13035-201ENSMUST00000117496 342 ntBASIC8.83□□□□□ -1
Cdx1P18111 Gm15131-201ENSMUST00000119124 595 ntBASIC8.83□□□□□ -1
Cdx1P18111 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC8.83□□□□□ -1
Cdx1P18111 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Gm17827-201ENSMUST00000211825 742 ntBASIC8.83□□□□□ -1
Cdx1P18111 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC8.83□□□□□ -1
Cdx1P18111 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Cdx1P18111 AC137950.2-201ENSMUST00000227127 1089 ntBASIC8.83□□□□□ -1
Cdx1P18111 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Ntng1-201ENSMUST00000051253 327 ntBASIC8.83□□□□□ -1
Cdx1P18111 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Gm9271-201ENSMUST00000185988 2580 ntBASIC8.83□□□□□ -1
Cdx1P18111 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cdx1P18111 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC8.83□□□□□ -1
Cdx1P18111 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC8.83□□□□□ -1
Cdx1P18111 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cdx1P18111 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC8.82□□□□□ -1
Cdx1P18111 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Gm14058-201ENSMUST00000116082 735 ntBASIC8.82□□□□□ -1
Cdx1P18111 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC8.82□□□□□ -1
Cdx1P18111 Gm13045-201ENSMUST00000119019 712 ntBASIC8.82□□□□□ -1
Cdx1P18111 Gm12501-201ENSMUST00000119163 529 ntBASIC8.82□□□□□ -1
Cdx1P18111 Gm15432-201ENSMUST00000121106 195 ntBASIC8.82□□□□□ -1
Cdx1P18111 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Gm9022-201ENSMUST00000182482 992 ntBASIC8.82□□□□□ -1
Cdx1P18111 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC8.82□□□□□ -1
Cdx1P18111 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Gm7183-201ENSMUST00000213870 1005 ntBASIC8.82□□□□□ -1
Cdx1P18111 AC125486.1-201ENSMUST00000218701 320 ntBASIC8.82□□□□□ -1
Cdx1P18111 Gm21027-201ENSMUST00000219300 1236 ntBASIC8.82□□□□□ -1
Cdx1P18111 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC8.82□□□□□ -1
Cdx1P18111 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.82□□□□□ -1
Cdx1P18111 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx1P18111 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC8.82□□□□□ -1
Cdx1P18111 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx1P18111 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms