Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Snord55-201ENSMUST00000174939 79 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm27438-201ENSMUST00000183480 110 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm9139-201ENSMUST00000218817 700 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp6P0C0A3 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm12986-201ENSMUST00000119037 967 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm12274-201ENSMUST00000120062 385 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm25072-201ENSMUST00000175233 235 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm8197-202ENSMUST00000193422 934 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm30946-201ENSMUST00000198288 724 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp6P0C0A3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm25063-201ENSMUST00000104666 94 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm4917-201ENSMUST00000121452 650 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms