Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CopeO89079 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CopeO89079 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
CopeO89079 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CopeO89079 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CopeO89079 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.16□□□□□ -0.62
CopeO89079 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Gm2260-201ENSMUST00000184965 657 ntBASIC11.16□□□□□ -0.62
CopeO89079 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.16□□□□□ -0.62
CopeO89079 Gm1821-202ENSMUST00000227415 750 ntBASIC11.16□□□□□ -0.62
CopeO89079 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Gm23105-201ENSMUST00000083719 134 ntBASIC11.16□□□□□ -0.62
CopeO89079 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.16□□□□□ -0.62
CopeO89079 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CopeO89079 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CopeO89079 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
CopeO89079 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
CopeO89079 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.15□□□□□ -0.62
CopeO89079 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Gm11836-201ENSMUST00000121022 441 ntBASIC11.15□□□□□ -0.62
CopeO89079 Gm14277-201ENSMUST00000121195 360 ntBASIC11.15□□□□□ -0.62
CopeO89079 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.15□□□□□ -0.62
CopeO89079 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.15□□□□□ -0.62
CopeO89079 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.15□□□□□ -0.62
CopeO89079 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
CopeO89079 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.15□□□□□ -0.62
CopeO89079 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
CopeO89079 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CopeO89079 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CopeO89079 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms