Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 CT025639.2-202ENSMUST00000225298 1630 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm38199-201ENSMUST00000192013 3277 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Gm43274-201ENSMUST00000202545 5000 ntBASIC12.35□□□□□ -0.43
Syce3B5KM66 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.35□□□□□ -0.43
Syce3B5KM66 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Syce3B5KM66 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.34□□□□□ -0.43
Syce3B5KM66 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Gm15528-201ENSMUST00000117821 864 ntBASIC12.34□□□□□ -0.43
Syce3B5KM66 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Gm24844-201ENSMUST00000158679 127 ntBASIC12.34□□□□□ -0.43
Syce3B5KM66 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Syce3B5KM66 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Gm29499-201ENSMUST00000189151 486 ntBASIC12.34□□□□□ -0.43
Syce3B5KM66 Gm28329-201ENSMUST00000191208 689 ntBASIC12.34□□□□□ -0.43
Syce3B5KM66 Gm29171-201ENSMUST00000191397 486 ntBASIC12.34□□□□□ -0.43
Syce3B5KM66 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Syce3B5KM66 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Syce3B5KM66 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Syce3B5KM66 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Syce3B5KM66 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Syce3B5KM66 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Syce3B5KM66 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC12.33□□□□□ -0.44
Syce3B5KM66 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syce3B5KM66 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.33□□□□□ -0.44
Syce3B5KM66 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Syce3B5KM66 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Syce3B5KM66 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms