Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn2B2RVW2 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.6□□□□□ -0.39
Clrn2B2RVW2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn2B2RVW2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn2B2RVW2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm16305-201ENSMUST00000140747 556 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm5976-201ENSMUST00000180794 996 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm6644-201ENSMUST00000186507 951 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm3791-201ENSMUST00000220790 768 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn2B2RVW2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clrn2B2RVW2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gm23604-201ENSMUST00000104311 132 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gm26174-201ENSMUST00000158415 219 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gm43726-201ENSMUST00000199110 775 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gm22341-201ENSMUST00000083775 129 ntBASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clrn2B2RVW2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms