Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm8091-201ENSMUST00000150506 886 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm28032-201ENSMUST00000184104 96 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 AC149294.3-201ENSMUST00000226888 732 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm16418-201ENSMUST00000118577 171 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm14407-201ENSMUST00000121260 447 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm3687-201ENSMUST00000161710 460 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm43761-201ENSMUST00000202132 991 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Cog3-203ENSMUST00000227473 4197 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm25770-201ENSMUST00000158566 115 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Gm5668-201ENSMUST00000220897 436 ntBASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdh23Q99PF4 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 AC153948.2-201ENSMUST00000218112 505 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 AC134898.1-201ENSMUST00000223738 1836 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm14856-201ENSMUST00000121548 613 ntBASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 1700013G24Rik-201ENSMUST00000048893 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdh23Q99PF4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Gm14332-201ENSMUST00000121982 899 ntBASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Gm7251-201ENSMUST00000182661 1009 ntBASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Gm17806-201ENSMUST00000195844 383 ntBASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdh23Q99PF4 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms