Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC124408.1-201ENSMUST00000228938 707 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm26226-201ENSMUST00000082509 116 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Nkx6-1Q99MA9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm11736-201ENSMUST00000121468 505 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Mir1941-201ENSMUST00000157834 83 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm27390-201ENSMUST00000184516 176 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm44498-201ENSMUST00000199509 111 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm44420-201ENSMUST00000203669 490 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-1Q99MA9 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm22388-201ENSMUST00000158194 248 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm4775-201ENSMUST00000169588 402 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm8601-201ENSMUST00000182096 909 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm29543-201ENSMUST00000188138 967 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm9723-201ENSMUST00000192100 457 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm38007-201ENSMUST00000192187 313 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm38233-201ENSMUST00000194259 807 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm8643-201ENSMUST00000195228 625 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm38349-201ENSMUST00000195732 462 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm42689-201ENSMUST00000202403 404 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.33□□□□□ -0.76
Nkx6-1Q99MA9 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms