Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm15528-201ENSMUST00000117821 864 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm12176-201ENSMUST00000121420 875 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm37905-201ENSMUST00000195310 341 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm37826-201ENSMUST00000195329 322 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm8285-201ENSMUST00000208293 759 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.49□□□□□ -0.57
Usp11Q99K46 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.49□□□□□ -0.57
Usp11Q99K46 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp11Q99K46 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm22846-201ENSMUST00000157706 270 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm24514-201ENSMUST00000174961 285 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm29067-201ENSMUST00000190821 470 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Usp11Q99K46 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.48□□□□□ -0.57
Usp11Q99K46 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Usp11Q99K46 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Usp11Q99K46 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Usp11Q99K46 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Usp11Q99K46 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms