Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm16518-201ENSMUST00000117960 508 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm16459-201ENSMUST00000121443 686 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Mir8111-201ENSMUST00000184463 137 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm18466-201ENSMUST00000209147 499 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Gm18001-201ENSMUST00000212023 688 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.87□□□□□ -0.35
Col20a1Q923P0 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.87□□□□□ -0.35
Col20a1Q923P0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col20a1Q923P0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm15031-201ENSMUST00000121341 210 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Gm9791-201ENSMUST00000060997 447 ntBASIC12.86□□□□□ -0.35
Col20a1Q923P0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col20a1Q923P0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm11919-201ENSMUST00000117609 721 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm16441-201ENSMUST00000138176 924 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm6038-201ENSMUST00000154310 948 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm6606-201ENSMUST00000193613 947 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm43547-201ENSMUST00000197729 328 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm7902-201ENSMUST00000198842 947 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm42710-201ENSMUST00000200608 985 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm45094-201ENSMUST00000207013 617 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Gm40879-201ENSMUST00000220759 612 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.85□□□□□ -0.35
Col20a1Q923P0 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col20a1Q923P0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col20a1Q923P0 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms