Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.25□□□□□ -0.61
Trim60Q8VI40 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Snord55-201ENSMUST00000174939 79 ntBASIC11.25□□□□□ -0.61
Trim60Q8VI40 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm44323-201ENSMUST00000198689 129 ntBASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.25□□□□□ -0.61
Trim60Q8VI40 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.25□□□□□ -0.61
Trim60Q8VI40 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.25□□□□□ -0.61
Trim60Q8VI40 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim60Q8VI40 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm12217-201ENSMUST00000118858 696 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm11956-201ENSMUST00000119525 512 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm30946-201ENSMUST00000198288 724 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm19091-201ENSMUST00000208120 978 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.24□□□□□ -0.61
Trim60Q8VI40 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim60Q8VI40 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms