Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm13408-201ENSMUST00000119822 798 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm15197-201ENSMUST00000120526 478 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm13935-201ENSMUST00000121859 798 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm4812-201ENSMUST00000182847 993 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm43163-201ENSMUST00000196571 442 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm44980-201ENSMUST00000205826 314 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm19091-201ENSMUST00000208120 978 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cchcr1Q8K2I2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm12663-201ENSMUST00000118481 958 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm12566-201ENSMUST00000121479 359 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm31941-201ENSMUST00000209689 350 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Gm9132-201ENSMUST00000210182 832 ntBASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cchcr1Q8K2I2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms