Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Gm15374-201ENSMUST00000119313 844 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Gm37597-201ENSMUST00000191853 382 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Gm5996-201ENSMUST00000211110 718 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Gm25201-201ENSMUST00000083093 170 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.87□□□□□ -0.35
Nup88Q8CEC0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm18059-201ENSMUST00000208073 580 ntBASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm39288-201ENSMUST00000210554 446 ntBASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.86□□□□□ -0.35
Nup88Q8CEC0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup88Q8CEC0 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm14807-201ENSMUST00000116640 983 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm11980-201ENSMUST00000121445 986 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm43380-201ENSMUST00000200421 220 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm35713-201ENSMUST00000210516 199 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm18514-201ENSMUST00000218980 436 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms