Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm32111-201ENSMUST00000207689 846 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 AA474408-201ENSMUST00000098110 3339 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Gm4454-201ENSMUST00000190585 2578 ntBASIC12.16□□□□□ -0.46
Ccdc38Q8CDN8 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm15881-201ENSMUST00000148792 942 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm25226-201ENSMUST00000158198 123 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm10263-201ENSMUST00000085163 300 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 AC117656.2-201ENSMUST00000224931 2215 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Gm6714-201ENSMUST00000218677 2330 ntBASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc38Q8CDN8 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm10531-201ENSMUST00000193527 2303 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm13408-201ENSMUST00000119822 798 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm13935-201ENSMUST00000121859 798 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm43163-201ENSMUST00000196571 442 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm42859-201ENSMUST00000199572 193 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms