Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm25053-201ENSMUST00000103982 133 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm25922-201ENSMUST00000104281 130 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm13422-201ENSMUST00000118834 504 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm15036-201ENSMUST00000118880 400 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm14395-201ENSMUST00000120494 563 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm24679-201ENSMUST00000158762 111 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm25053-202ENSMUST00000199731 132 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm45500-201ENSMUST00000211676 803 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm19640-201ENSMUST00000214849 464 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm18968-201ENSMUST00000221319 862 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm5468-202ENSMUST00000227851 682 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps53Q8CCB4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm28833-201ENSMUST00000189671 559 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm19587-201ENSMUST00000191395 545 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm43163-201ENSMUST00000196571 442 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Vps53Q8CCB4 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps53Q8CCB4 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps53Q8CCB4 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.71□□□□□ -0.37
Vps53Q8CCB4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps53Q8CCB4 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps53Q8CCB4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms