Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.4□□□□□ -0.1
Cps1Q8C196 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cps1Q8C196 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cps1Q8C196 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cps1Q8C196 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm25723-201ENSMUST00000104530 126 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm15702-201ENSMUST00000119680 444 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm8163-201ENSMUST00000122020 1060 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm23916-201ENSMUST00000158484 399 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Mir6360-201ENSMUST00000184278 126 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC14.4□□□□□ -0.1
Cps1Q8C196 Spin3-ps-201ENSMUST00000192825 770 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC14.4□□□□□ -0.1
Cps1Q8C196 CT009550.1-201ENSMUST00000225750 864 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Gm4883-201ENSMUST00000085702 528 ntBASIC14.4□□□□□ -0.1
Cps1Q8C196 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cps1Q8C196 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cps1Q8C196 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm44907-201ENSMUST00000207423 1633 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Cps1Q8C196 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.39□□□□□ -0.11
Cps1Q8C196 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC14.39□□□□□ -0.11
Cps1Q8C196 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC14.39□□□□□ -0.11
Cps1Q8C196 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cps1Q8C196 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC14.39□□□□□ -0.11
Cps1Q8C196 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm23479-201ENSMUST00000158876 122 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Mir3100-201ENSMUST00000174918 65 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm2021-201ENSMUST00000190623 464 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm6069-201ENSMUST00000196501 463 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm44716-201ENSMUST00000209007 710 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm7319-201ENSMUST00000210047 778 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC14.39□□□□□ -0.11
Cps1Q8C196 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 AC132881.1-201ENSMUST00000223780 1062 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 AC157650.1-201ENSMUST00000224582 610 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.39□□□□□ -0.11
Cps1Q8C196 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cps1Q8C196 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cps1Q8C196 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm7190-201ENSMUST00000118669 1452 ntBASIC14.38□□□□□ -0.11
Cps1Q8C196 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cps1Q8C196 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm37232-201ENSMUST00000194887 367 ntBASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC14.38□□□□□ -0.11
Cps1Q8C196 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm17815-201ENSMUST00000198305 895 ntBASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm18119-201ENSMUST00000219972 616 ntBASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
Cps1Q8C196 CT025547.1-201ENSMUST00000225127 578 ntBASIC14.38□□□□□ -0.11
Cps1Q8C196 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Gm45728-201ENSMUST00000211475 2979 ntBASIC14.38□□□□□ -0.11
Cps1Q8C196 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cps1Q8C196 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms