Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm7541-201ENSMUST00000118361 535 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm27956-201ENSMUST00000175604 260 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm9625-201ENSMUST00000180422 955 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm43097-201ENSMUST00000196867 151 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 BC080696-201ENSMUST00000202858 1218 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm40879-201ENSMUST00000220759 612 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf2Q8BZT2 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm25545-201ENSMUST00000122673 323 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12906-201ENSMUST00000154610 441 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm25226-201ENSMUST00000158198 123 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm43547-201ENSMUST00000197729 328 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm8162-201ENSMUST00000213951 665 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.05□□□□□ -0.64
Sh3rf2Q8BZT2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms