Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.72□□□□□ -0.69
Scaf4Q6PFF0 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm13035-201ENSMUST00000117496 342 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm15615-201ENSMUST00000118876 198 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm14395-201ENSMUST00000120494 563 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm37981-201ENSMUST00000194280 535 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm42660-201ENSMUST00000197733 947 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.71□□□□□ -0.69
Scaf4Q6PFF0 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Scaf4Q6PFF0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Scaf4Q6PFF0 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Scaf4Q6PFF0 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Scaf4Q6PFF0 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Scaf4Q6PFF0 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm15198-201ENSMUST00000117283 177 ntBASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Scaf4Q6PFF0 Gm12266-201ENSMUST00000120311 962 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms