Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm16480-201ENSMUST00000120439 832 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm15793-201ENSMUST00000121857 495 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm8756-201ENSMUST00000183250 929 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm37851-201ENSMUST00000193871 889 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm32111-201ENSMUST00000207689 846 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup98Q6PFD9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Snora68-201ENSMUST00000104375 131 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm13426-201ENSMUST00000117887 795 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm23999-201ENSMUST00000158057 104 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm8226-201ENSMUST00000190511 798 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm21631-201ENSMUST00000195041 754 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 AC154683.1-201ENSMUST00000228409 1284 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm9701-201ENSMUST00000077976 427 ntBASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup98Q6PFD9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Mir1896-201ENSMUST00000122641 81 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm34248-201ENSMUST00000200027 474 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup98Q6PFD9 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms