Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rc3h1Q4VGL6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm5133-201ENSMUST00000118940 1255 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm12712-201ENSMUST00000120676 801 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm12745-201ENSMUST00000121767 214 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm11993-201ENSMUST00000121861 820 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm11354-201ENSMUST00000121974 422 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm5970-201ENSMUST00000131638 1216 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm25677-201ENSMUST00000174983 72 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm38217-201ENSMUST00000194358 910 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm38018-201ENSMUST00000195651 540 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm42433-201ENSMUST00000196806 940 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm43553-201ENSMUST00000200900 685 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm18042-201ENSMUST00000219887 790 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rc3h1Q4VGL6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Gm24312-201ENSMUST00000178677 119 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Rc3h1Q4VGL6 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms