Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Gm44329-201ENSMUST00000197469 112 ntBASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Syne3Q4FZC9 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Syne3Q4FZC9 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Syne3Q4FZC9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Syne3Q4FZC9 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm4917-201ENSMUST00000121452 650 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm43163-201ENSMUST00000196571 442 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm8365-201ENSMUST00000197334 648 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Syne3Q4FZC9 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Gm12274-201ENSMUST00000120062 385 ntBASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Gm15197-201ENSMUST00000120526 478 ntBASIC11.57□□□□□ -0.56
Syne3Q4FZC9 Gm12176-201ENSMUST00000121420 875 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms