Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Gm37317-201ENSMUST00000192198 1024 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 CT025603.2-201ENSMUST00000224369 484 ntBASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ush2AQ2QI47 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Nectin3-205ENSMUST00000121245 953 ntTSL 3 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 1810019D21Rik-203ENSMUST00000145343 984 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm5723-201ENSMUST00000203096 432 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm5499-201ENSMUST00000090731 885 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 AC167565.2-201ENSMUST00000227042 1870 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm26705-201ENSMUST00000180761 1457 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm28791-201ENSMUST00000185888 1779 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Iqcc-202ENSMUST00000121442 491 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm7707-201ENSMUST00000165950 1156 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm5283-201ENSMUST00000177874 334 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm8907-201ENSMUST00000182240 1003 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Catspere1-201ENSMUST00000194528 2949 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 AC154517.2-201ENSMUST00000220829 2458 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 n-R5s76-201ENSMUST00000122700 113 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Pisrt1-201ENSMUST00000195532 515 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Oaz3-206ENSMUST00000204548 787 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm15398-202ENSMUST00000219998 1477 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm10686-201ENSMUST00000215389 3247 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm6807-201ENSMUST00000077435 888 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Gm43790-201ENSMUST00000202694 2013 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC5.52□□□□□ -1.53
Ush2AQ2QI47 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms