Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chrna5Q2MKA5 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Snora68-201ENSMUST00000104375 131 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm23432-201ENSMUST00000157181 131 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Mir7088-201ENSMUST00000184227 86 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm37009-201ENSMUST00000193297 361 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm42859-201ENSMUST00000199572 193 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm8557-201ENSMUST00000220777 475 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna5Q2MKA5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm6425-201ENSMUST00000136332 790 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 AC127583.1-201ENSMUST00000224351 540 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm6304-201ENSMUST00000096579 447 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms