Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GabpaQ00422 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GabpaQ00422 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
GabpaQ00422 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
GabpaQ00422 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Gm15031-201ENSMUST00000121341 210 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
GabpaQ00422 Gm13827-201ENSMUST00000148801 372 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.36□□□□□ -0.43
GabpaQ00422 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Gm25125-201ENSMUST00000083340 136 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Gm10580-201ENSMUST00000097985 396 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Gm10582-201ENSMUST00000097987 396 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Gm10583-201ENSMUST00000097988 396 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
GabpaQ00422 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GabpaQ00422 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GabpaQ00422 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.36□□□□□ -0.43
GabpaQ00422 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
GabpaQ00422 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Gm13204-201ENSMUST00000120110 821 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Gm26313-201ENSMUST00000157770 308 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Gm24954-201ENSMUST00000178831 110 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Gm7928-201ENSMUST00000181249 701 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Gm7572-201ENSMUST00000182616 766 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Gm37207-201ENSMUST00000194284 296 ntBASIC12.35□□□□□ -0.43
GabpaQ00422 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
GabpaQ00422 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
GabpaQ00422 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GabpaQ00422 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GabpaQ00422 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GabpaQ00422 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GabpaQ00422 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms