Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Lsm3P62311 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Lsm3P62311 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
Lsm3P62311 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
Lsm3P62311 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.8□□□□□ -0.84
Lsm3P62311 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.8□□□□□ -0.84
Lsm3P62311 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.8□□□□□ -0.84
Lsm3P62311 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm25661-201ENSMUST00000157704 296 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm28686-201ENSMUST00000187404 609 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm3P62311 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm45598-202ENSMUST00000210719 986 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm3P62311 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Lsm3P62311 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm3P62311 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm3P62311 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.8□□□□□ -0.84
Lsm3P62311 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Lsm3P62311 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Gm15547-201ENSMUST00000122152 333 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Lsm3P62311 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm26956-201ENSMUST00000182176 986 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Morn2-202ENSMUST00000227729 656 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm3P62311 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm3P62311 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm3P62311 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm3P62311 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Lsm3P62311 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.79□□□□□ -0.84
Lsm3P62311 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm3P62311 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms