Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm25018-201ENSMUST00000179081 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm25212-201ENSMUST00000179432 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm26443-201ENSMUST00000179610 110 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm26391-201ENSMUST00000179843 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm38233-201ENSMUST00000194259 807 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Atxn1P54254 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Atxn1P54254 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Atxn1P54254 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.9□□□□□ -0.66
Atxn1P54254 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC10.9□□□□□ -0.66
Atxn1P54254 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Gm24089-201ENSMUST00000093696 109 ntBASIC10.9□□□□□ -0.66
Atxn1P54254 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Atxn1P54254 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Atxn1P54254 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.9□□□□□ -0.67
Atxn1P54254 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Atxn1P54254 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Atxn1P54254 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Atxn1P54254 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Atxn1P54254 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Atxn1P54254 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Atxn1P54254 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Atxn1P54254 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Atxn1P54254 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Snord23-201ENSMUST00000116828 109 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm11540-201ENSMUST00000117457 780 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm16209-201ENSMUST00000118457 627 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm13284-201ENSMUST00000121020 547 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm11736-201ENSMUST00000121468 505 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm10171-201ENSMUST00000126220 628 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm24992-201ENSMUST00000157412 130 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm4705-201ENSMUST00000177415 354 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm21778-201ENSMUST00000178779 471 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm5976-201ENSMUST00000180794 996 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Gm20781-201ENSMUST00000193154 693 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm21736-201ENSMUST00000195399 693 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.89□□□□□ -0.67
Atxn1P54254 Gm5178-201ENSMUST00000219380 898 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Id2-203ENSMUST00000222667 958 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Gm10233-201ENSMUST00000089275 628 ntBASIC10.89□□□□□ -0.67
Atxn1P54254 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Atxn1P54254 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atxn1P54254 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms