Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Rfx1P48377 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx1P48377 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx1P48377 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm43307-201ENSMUST00000199465 2371 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Gm22711-201ENSMUST00000116890 133 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Gm13809-201ENSMUST00000117921 597 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.97□□□□□ -0.33
Rfx1P48377 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Gm37284-201ENSMUST00000193607 539 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx1P48377 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm2517-201ENSMUST00000215651 348 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.97□□□□□ -0.33
Rfx1P48377 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.97□□□□□ -0.33
Rfx1P48377 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Rfx1P48377 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx1P48377 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rfx1P48377 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rfx1P48377 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rfx1P48377 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rfx1P48377 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Rfx1P48377 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.96□□□□□ -0.33
Rfx1P48377 Gm7851-201ENSMUST00000117574 323 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.96□□□□□ -0.33
Rfx1P48377 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.96□□□□□ -0.33
Rfx1P48377 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rfx1P48377 Gm27552-201ENSMUST00000183351 62 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Gm27844-201ENSMUST00000183613 62 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Gm45186-201ENSMUST00000206874 478 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Rfx1P48377 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.96□□□□□ -0.33
Rfx1P48377 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Rfx1P48377 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rfx1P48377 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx1P48377 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx1P48377 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.96□□□□□ -0.34
Rfx1P48377 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rfx1P48377 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.96□□□□□ -0.34
Rfx1P48377 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.96□□□□□ -0.34
Rfx1P48377 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rfx1P48377 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms