Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm5529-201ENSMUST00000165691 891 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm8285-201ENSMUST00000208293 759 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.76□□□□□ -0.69
Cd9P40240 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cd9P40240 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cd9P40240 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 Gm11380-201ENSMUST00000118067 560 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.75□□□□□ -0.69
Cd9P40240 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Gm43811-201ENSMUST00000202862 695 ntBASIC10.75□□□□□ -0.69
Cd9P40240 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.75□□□□□ -0.69
Cd9P40240 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cd9P40240 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cd9P40240 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd9P40240 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cd9P40240 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.75□□□□□ -0.69
Cd9P40240 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd9P40240 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.74□□□□□ -0.69
Cd9P40240 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Cd9P40240 AA474408-201ENSMUST00000098110 3339 ntBASIC10.74□□□□□ -0.69
Cd9P40240 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Cd9P40240 Gm12899-201ENSMUST00000120565 551 ntBASIC10.74□□□□□ -0.69
Cd9P40240 Gm20392-201ENSMUST00000173047 701 ntBASIC10.74□□□□□ -0.69
Cd9P40240 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.74□□□□□ -0.69
Cd9P40240 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd9P40240 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms