Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Timp3P39876 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Timp3P39876 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Gm6092-201ENSMUST00000121659 2029 ntBASIC9□□□□□ -0.97
Timp3P39876 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Gm28424-201ENSMUST00000187393 1319 ntBASIC9□□□□□ -0.97
Timp3P39876 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Timp3P39876 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Timp3P39876 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm5171-201ENSMUST00000214944 1415 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 AC140462.2-201ENSMUST00000225718 2433 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Timp3P39876 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Gm15197-201ENSMUST00000120526 478 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Gm24992-201ENSMUST00000157412 130 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC8.99□□□□□ -0.97
Timp3P39876 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm42867-201ENSMUST00000202995 469 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm45592-201ENSMUST00000209605 1043 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Gm39288-201ENSMUST00000210554 446 ntBASIC8.99□□□□□ -0.97
Timp3P39876 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 AC174797.2-202ENSMUST00000225729 568 ntBASIC8.99□□□□□ -0.97
Timp3P39876 AC154572.1-201ENSMUST00000226098 1204 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC8.99□□□□□ -0.97
Timp3P39876 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Timp3P39876 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Gm8899-201ENSMUST00000214635 1332 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Gm12799-201ENSMUST00000118151 2560 ntBASIC8.99□□□□□ -0.97
Timp3P39876 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Timp3P39876 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Timp3P39876 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Timp3P39876 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Timp3P39876 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms