Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vcam1P29533 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Vcam1P29533 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.5□□□□□ -0.41
Vcam1P29533 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.5□□□□□ -0.41
Vcam1P29533 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.5□□□□□ -0.41
Vcam1P29533 Gm15258-201ENSMUST00000153801 741 ntBASIC12.5□□□□□ -0.41
Vcam1P29533 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Vcam1P29533 Gm44420-201ENSMUST00000203669 490 ntBASIC12.5□□□□□ -0.41
Vcam1P29533 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.5□□□□□ -0.41
Vcam1P29533 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vcam1P29533 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Vcam1P29533 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vcam1P29533 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.5□□□□□ -0.41
Vcam1P29533 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.5□□□□□ -0.41
Vcam1P29533 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Vcam1P29533 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.49□□□□□ -0.41
Vcam1P29533 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Vcam1P29533 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vcam1P29533 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.49□□□□□ -0.41
Vcam1P29533 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.49□□□□□ -0.41
Vcam1P29533 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Mir6953-201ENSMUST00000184745 68 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Gm37688-201ENSMUST00000195195 465 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Gm18123-201ENSMUST00000210874 822 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Gm18122-201ENSMUST00000211390 904 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Gm45893-201ENSMUST00000211899 247 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Gm5278-201ENSMUST00000055957 552 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vcam1P29533 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Gm8894-201ENSMUST00000074642 666 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.49□□□□□ -0.41
Vcam1P29533 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vcam1P29533 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm15707-201ENSMUST00000118804 996 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Gm9166-201ENSMUST00000120293 561 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm24078-201ENSMUST00000158184 103 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Gm23582-201ENSMUST00000158530 139 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Vcam1P29533 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms