Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
P20040 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
P20040 Gm12419-201ENSMUST00000116649 636 ntBASIC9.7□□□□□ -0.86
P20040 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.7□□□□□ -0.86
P20040 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Gm20495-201ENSMUST00000173902 235 ntBASIC9.7□□□□□ -0.86
P20040 Mir3547-201ENSMUST00000175461 88 ntBASIC9.7□□□□□ -0.86
P20040 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Gm37299-201ENSMUST00000193951 826 ntBASIC9.7□□□□□ -0.86
P20040 Gm44315-201ENSMUST00000203041 219 ntBASIC9.7□□□□□ -0.86
P20040 Gm32111-201ENSMUST00000207689 846 ntBASIC9.7□□□□□ -0.86
P20040 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.7□□□□□ -0.86
P20040 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
P20040 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
P20040 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.7□□□□□ -0.86
P20040 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
P20040 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
P20040 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.7□□□□□ -0.86
P20040 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.7□□□□□ -0.86
P20040 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.7□□□□□ -0.86
P20040 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
P20040 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.7□□□□□ -0.86
P20040 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P20040 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.7□□□□□ -0.86
P20040 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.7□□□□□ -0.86
P20040 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.7□□□□□ -0.86
P20040 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.69□□□□□ -0.86
P20040 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.69□□□□□ -0.86
P20040 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Gm23272-201ENSMUST00000104053 129 ntBASIC9.69□□□□□ -0.86
P20040 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
P20040 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.69□□□□□ -0.86
P20040 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.69□□□□□ -0.86
P20040 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.69□□□□□ -0.86
P20040 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.69□□□□□ -0.86
P20040 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.69□□□□□ -0.86
P20040 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.69□□□□□ -0.86
P20040 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.69□□□□□ -0.86
P20040 Gm29787-201ENSMUST00000222129 849 ntBASIC9.69□□□□□ -0.86
P20040 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.69□□□□□ -0.86
P20040 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
P20040 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.69□□□□□ -0.86
P20040 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
P20040 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.69□□□□□ -0.86
P20040 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
P20040 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.68□□□□□ -0.86
P20040 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms