Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm12986-201ENSMUST00000119037 967 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm14395-201ENSMUST00000120494 563 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm17040-202ENSMUST00000170597 889 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm27953-201ENSMUST00000185171 143 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmgn1P18608 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.92□□□□□ -0.82
Hmgn1P18608 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hmgn1P18608 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmgn1P18608 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm5468-202ENSMUST00000227851 682 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hmgn1P18608 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.91□□□□□ -0.82
Hmgn1P18608 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hmgn1P18608 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmgn1P18608 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.9□□□□□ -0.82
Hmgn1P18608 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Hmgn1P18608 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.9□□□□□ -0.82
Hmgn1P18608 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Hmgn1P18608 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Hmgn1P18608 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hmgn1P18608 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms