Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm15636-201ENSMUST00000119205 668 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm4462-201ENSMUST00000166453 492 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm7833-201ENSMUST00000183288 990 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc9P09633 AC124613.1-201ENSMUST00000198711 88 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm8725-201ENSMUST00000221829 1333 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc9P09633 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Gm13120-201ENSMUST00000117343 1446 ntBASIC14.06□□□□□ -0.16
Hoxc9P09633 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm8482-201ENSMUST00000117972 471 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm13841-201ENSMUST00000118829 483 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm11473-201ENSMUST00000118980 359 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm11449-201ENSMUST00000119175 476 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm8210-201ENSMUST00000178557 483 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm15454-201ENSMUST00000179718 483 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm9409-201ENSMUST00000197017 316 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm44540-201ENSMUST00000205640 354 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc9P09633 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc9P09633 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc9P09633 AC154461.1-201ENSMUST00000224207 1005 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm6344-201ENSMUST00000075962 483 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm4865-201ENSMUST00000196284 1309 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 AC107763.1-201ENSMUST00000226082 1365 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Gm6783-201ENSMUST00000120916 1437 ntBASIC14.05□□□□□ -0.16
Hoxc9P09633 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc9P09633 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc9P09633 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms