Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
AlyrefO08583 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
AlyrefO08583 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm15074-201ENSMUST00000117603 936 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm44251-201ENSMUST00000204963 442 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm5178-201ENSMUST00000219380 898 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 AC134439.1-201ENSMUST00000220923 600 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 AC168059.2-201ENSMUST00000224473 333 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
AlyrefO08583 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
AlyrefO08583 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.26□□□□□ -0.61
AlyrefO08583 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
AlyrefO08583 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.26□□□□□ -0.61
AlyrefO08583 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.26□□□□□ -0.61
AlyrefO08583 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
AlyrefO08583 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AlyrefO08583 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Mir466f-2-201ENSMUST00000104805 94 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.25□□□□□ -0.61
AlyrefO08583 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.25□□□□□ -0.61
AlyrefO08583 Gm16418-201ENSMUST00000118577 171 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm14639-201ENSMUST00000120850 866 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Gm28923-201ENSMUST00000187755 322 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm5259-201ENSMUST00000191231 800 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm42908-201ENSMUST00000197508 870 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm42689-201ENSMUST00000202403 404 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm5040-201ENSMUST00000218609 800 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Gm5191-201ENSMUST00000222882 1236 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
AlyrefO08583 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
AlyrefO08583 Btrc-209ENSMUST00000224478 2194 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.25□□□□□ -0.61
AlyrefO08583 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AlyrefO08583 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
AlyrefO08583 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AlyrefO08583 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.24□□□□□ -0.61
AlyrefO08583 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.24□□□□□ -0.61
AlyrefO08583 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
AlyrefO08583 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AlyrefO08583 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
AlyrefO08583 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms