Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Defa-ps4-201ENSMUST00000118021 183 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm18367-201ENSMUST00000176139 600 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm27341-201ENSMUST00000183570 106 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm37284-201ENSMUST00000193607 539 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm43186-201ENSMUST00000198130 824 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm5363-201ENSMUST00000211927 938 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Pcdh1F7BJK1 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm22920-201ENSMUST00000102175 109 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm15236-201ENSMUST00000117309 379 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm7851-201ENSMUST00000117574 323 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm15264-201ENSMUST00000118050 502 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Platr10-202ENSMUST00000191479 818 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm2517-201ENSMUST00000215651 348 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pcdh1F7BJK1 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms