Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm22481-201ENSMUST00000122562 192 ntBASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Gm44936-201ENSMUST00000207324 735 ntBASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 AC140393.4-201ENSMUST00000226994 765 ntBASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc188F6WEU2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm38309-201ENSMUST00000192063 1518 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm24981-201ENSMUST00000104459 132 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm9458-201ENSMUST00000135273 727 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm25426-201ENSMUST00000157606 170 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Mir6909-201ENSMUST00000184212 62 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm29164-201ENSMUST00000185454 1024 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm45416-201ENSMUST00000209713 2201 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 AC154575.1-201ENSMUST00000227166 1474 ntBASIC11□□□□□ -0.65
Ccdc188F6WEU2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc188F6WEU2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Gm5046-201ENSMUST00000100608 611 ntBASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Gm14853-201ENSMUST00000116081 549 ntBASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Gm6677-201ENSMUST00000195100 441 ntBASIC10.99□□□□□ -0.65
Ccdc188F6WEU2 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms