Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm37028-201ENSMUST00000194276 107 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm3726-201ENSMUST00000203110 785 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm45219-201ENSMUST00000205602 465 ntBASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chmp2aQ9DB34 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Snord23-201ENSMUST00000116828 109 ntBASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Mir1901-201ENSMUST00000122616 78 ntBASIC11.37□□□□□ -0.59
Chmp2aQ9DB34 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms