Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cttnbp2nlQ99LJ0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cttnbp2nlQ99LJ0 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cttnbp2nlQ99LJ0 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm13461-201ENSMUST00000120980 662 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.02□□□□□ -0.65
Cttnbp2nlQ99LJ0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 AC165148.1-201ENSMUST00000224795 2372 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm11941-201ENSMUST00000119904 610 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm7741-201ENSMUST00000181445 989 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm2383-201ENSMUST00000181461 807 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm27441-201ENSMUST00000185000 105 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm29499-201ENSMUST00000189151 486 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm28329-201ENSMUST00000191208 689 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm29171-201ENSMUST00000191397 486 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm38321-201ENSMUST00000195053 235 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm37301-201ENSMUST00000195412 568 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Gm19208-201ENSMUST00000213861 912 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Cttnbp2nlQ99LJ0 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms