Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clp1Q99LI9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clp1Q99LI9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm6755-201ENSMUST00000100598 864 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm6740-201ENSMUST00000100617 864 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm15636-201ENSMUST00000119205 668 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm25394-201ENSMUST00000157338 133 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm28032-201ENSMUST00000184104 96 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm29808-201ENSMUST00000194419 468 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm17936-201ENSMUST00000199413 988 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm45072-201ENSMUST00000208673 929 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm45893-201ENSMUST00000211899 247 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm10238-201ENSMUST00000089689 408 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Erich3-203ENSMUST00000189969 3460 ntBASIC11.59□□□□□ -0.55
Clp1Q99LI9 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Clp1Q99LI9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.58□□□□□ -0.55
Clp1Q99LI9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm649-201ENSMUST00000117284 1054 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm6238-201ENSMUST00000120999 465 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm37629-201ENSMUST00000193635 1050 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm42803-201ENSMUST00000201051 451 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm45610-201ENSMUST00000209227 784 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Gm22341-201ENSMUST00000083775 129 ntBASIC11.58□□□□□ -0.56
Clp1Q99LI9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clp1Q99LI9 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms