Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm42833-201ENSMUST00000196019 2124 ntBASIC13.49□□□□□ -0.25
RtcbQ99LF4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm12463-201ENSMUST00000118271 849 ntBASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm5244-201ENSMUST00000164001 339 ntBASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm22662-201ENSMUST00000175290 256 ntBASIC13.49□□□□□ -0.25
RtcbQ99LF4 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RtcbQ99LF4 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Gm45719-201ENSMUST00000207954 1662 ntBASIC13.49□□□□□ -0.25
RtcbQ99LF4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RtcbQ99LF4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.48□□□□□ -0.25
RtcbQ99LF4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Gm6425-201ENSMUST00000136332 790 ntBASIC13.48□□□□□ -0.25
RtcbQ99LF4 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Gm37860-201ENSMUST00000195380 1034 ntBASIC13.48□□□□□ -0.25
RtcbQ99LF4 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RtcbQ99LF4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.47□□□□□ -0.25
RtcbQ99LF4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Gm12397-201ENSMUST00000117674 615 ntBASIC13.47□□□□□ -0.25
RtcbQ99LF4 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.47□□□□□ -0.25
RtcbQ99LF4 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Gm26957-201ENSMUST00000182645 977 ntBASIC13.47□□□□□ -0.25
RtcbQ99LF4 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC13.47□□□□□ -0.25
RtcbQ99LF4 Gm43930-201ENSMUST00000203868 845 ntBASIC13.47□□□□□ -0.25
RtcbQ99LF4 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms