Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.96□□□□□ -0.81
Lims1Q99JW4 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.96□□□□□ -0.81
Lims1Q99JW4 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lims1Q99JW4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm12986-201ENSMUST00000119037 967 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm4654-201ENSMUST00000183305 982 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm6677-201ENSMUST00000195100 441 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Mir7686-201ENSMUST00000200604 57 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm44155-201ENSMUST00000203923 412 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm44100-201ENSMUST00000204329 436 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lims1Q99JW4 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.96□□□□□ -0.82
Lims1Q99JW4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm16166-201ENSMUST00000118291 787 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm23699-201ENSMUST00000158835 135 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm20426-201ENSMUST00000173657 440 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm21092-201ENSMUST00000178995 955 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm4812-201ENSMUST00000182847 993 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm9211-201ENSMUST00000182882 975 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm44551-201ENSMUST00000208804 171 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms