Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga6Q91XY2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm16305-201ENSMUST00000140747 556 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm4868-201ENSMUST00000164138 789 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm26119-201ENSMUST00000175601 104 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm37207-201ENSMUST00000194284 296 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm29808-201ENSMUST00000194419 468 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm10580-201ENSMUST00000097985 396 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm10582-201ENSMUST00000097987 396 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm10583-201ENSMUST00000097988 396 ntBASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga6Q91XY2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm13286-201ENSMUST00000117750 537 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm8019-201ENSMUST00000119317 587 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm14441-201ENSMUST00000121960 540 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm4943-201ENSMUST00000132879 424 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Mir7035-201ENSMUST00000184713 82 ntBASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms