Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Gm4812-201ENSMUST00000182847 993 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim60Q8VI40 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim60Q8VI40 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.27□□□□□ -0.6
Trim60Q8VI40 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim60Q8VI40 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim60Q8VI40 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim60Q8VI40 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim60Q8VI40 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.27□□□□□ -0.61
Trim60Q8VI40 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.27□□□□□ -0.61
Trim60Q8VI40 Nsd1-205ENSMUST00000224693 852 ntBASIC11.27□□□□□ -0.61
Trim60Q8VI40 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim60Q8VI40 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm9133-201ENSMUST00000118289 540 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm4909-201ENSMUST00000118749 794 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Mir6927-201ENSMUST00000184494 71 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm5865-201ENSMUST00000198713 637 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 Mir7686-201ENSMUST00000200604 57 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm31941-201ENSMUST00000209689 350 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 Mt1-202ENSMUST00000211807 1085 ntBASIC11.26□□□□□ -0.61
Trim60Q8VI40 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim60Q8VI40 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms