Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm45663-201ENSMUST00000210429 1632 ntBASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx54Q8K4L0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm15727-201ENSMUST00000122416 437 ntBASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm22994-201ENSMUST00000175422 82 ntBASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm22616-201ENSMUST00000179783 100 ntBASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm38301-201ENSMUST00000195573 543 ntBASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm8162-201ENSMUST00000213951 665 ntBASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx54Q8K4L0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm12397-201ENSMUST00000117674 615 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm23555-201ENSMUST00000157815 135 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm6946-201ENSMUST00000182237 987 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Mir8104-201ENSMUST00000185165 101 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm6677-201ENSMUST00000195100 441 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Gm44388-201ENSMUST00000204350 258 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 AC154640.1-203ENSMUST00000228316 1618 ntBASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx54Q8K4L0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm14538-201ENSMUST00000122019 1327 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm11929-201ENSMUST00000118175 945 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm37319-201ENSMUST00000193500 636 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm44658-201ENSMUST00000207965 637 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm7727-201ENSMUST00000219830 671 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Gm45719-201ENSMUST00000207954 1662 ntBASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx54Q8K4L0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms