Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc28aQ8CEI3 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm12419-201ENSMUST00000116649 636 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm14017-201ENSMUST00000121934 386 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm27552-201ENSMUST00000183351 62 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm27844-201ENSMUST00000183613 62 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm37835-201ENSMUST00000193305 361 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Gm45186-201ENSMUST00000206874 478 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28aQ8CEI3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28aQ8CEI3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm12986-201ENSMUST00000119037 967 ntBASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm4812-201ENSMUST00000182847 993 ntBASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm19091-201ENSMUST00000208120 978 ntBASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28aQ8CEI3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28aQ8CEI3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms