Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccdc28bQ8CEG5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Gm38001-201ENSMUST00000192900 3761 ntBASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC10.77□□□□□ -0.68
Ccdc28bQ8CEG5 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12579-201ENSMUST00000118040 783 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12196-201ENSMUST00000120954 262 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm8100-201ENSMUST00000182906 988 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm19208-201ENSMUST00000213861 912 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc28bQ8CEG5 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm45797-201ENSMUST00000212759 1921 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm4294-201ENSMUST00000105169 614 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm14381-201ENSMUST00000122105 414 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm3150-201ENSMUST00000166418 204 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm20482-202ENSMUST00000174729 825 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Mir8109-201ENSMUST00000184375 117 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm7504-201ENSMUST00000201449 424 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms