Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm5705-201ENSMUST00000066241 711 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm26448-201ENSMUST00000082446 203 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Tsen54Q8C2A2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm4909-201ENSMUST00000118749 794 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm26047-201ENSMUST00000157308 113 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm26047-202ENSMUST00000198840 115 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Tsen54Q8C2A2 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Tsen54Q8C2A2 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms