Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Sh3rf2Q8BZT2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm23745-201ENSMUST00000104230 125 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm40414-201ENSMUST00000197608 481 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm44640-201ENSMUST00000206894 247 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf2Q8BZT2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12947-201ENSMUST00000116114 420 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm22344-201ENSMUST00000122642 278 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm6677-201ENSMUST00000195100 441 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm43564-201ENSMUST00000196185 211 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm44498-201ENSMUST00000199509 111 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm2448-201ENSMUST00000207080 559 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf2Q8BZT2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms