Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm9790-201ENSMUST00000054148 288 ntBASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.27□□□□□ -0.45
Trnp1Q80ZI1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm14650-201ENSMUST00000120400 889 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm26208-201ENSMUST00000158677 124 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm38145-201ENSMUST00000192319 693 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm6008-201ENSMUST00000206542 874 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 AC159006.3-201ENSMUST00000226918 664 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.26□□□□□ -0.45
Trnp1Q80ZI1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm11235-201ENSMUST00000117763 333 ntBASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm5501-201ENSMUST00000165917 832 ntBASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm45308-201ENSMUST00000210610 415 ntBASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trnp1Q80ZI1 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms