Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Mir7035-201ENSMUST00000184713 82 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Platr10-202ENSMUST00000191479 818 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm4903-201ENSMUST00000210462 405 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm18042-201ENSMUST00000219887 790 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm8181-201ENSMUST00000062242 669 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm11980-201ENSMUST00000121445 986 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Mir1893-201ENSMUST00000122565 83 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm9487-201ENSMUST00000216600 472 ntBASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh19Q80TF3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm14776-201ENSMUST00000121029 887 ntBASIC10.78□□□□□ -0.68
Pcdh19Q80TF3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms