Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm12418-201ENSMUST00000118116 942 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm43249-201ENSMUST00000200464 458 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.25□□□□□ -0.45
Trim37Q6PCX9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm14395-201ENSMUST00000120494 563 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm15815-201ENSMUST00000120569 255 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm15982-201ENSMUST00000121681 554 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim37Q6PCX9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms